PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195462.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 331aa    MW: 35749.4 Da    PI: 10.3447
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.32.4e-31260317359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  XP_019195462.1 260 DDFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 317
                     99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MAVELMMDYR HGGNGRSSDL SFAKKLEESA VAQEAASGLE SVHTFIRLLS QQQQNKAAES  60
REKSSVEIEM VADVAVNKFQ KVINLLGRTR TGHARFRRAP VVSSLPVPAK DIQVDTKVYN  120
PTPIQQVLPP VAFDHSPRPK SAAGGGGGGG KTISFSYSPE VSRANSFNLS SLTGETESKQ  180
ASSSSAFQIT NLSLASSGGK PPLSSSSLKR KCSSSENNLS GKCSGGSSGR CHCSKRKKLR  240
QKRVTRVPAI SMKMADIPPD DFSWRKYGQK PIKGSPHPRG YYKCSSVRGC PARKHVERAL  300
DDPTMLIVTY EGEHNHSLSV PETSSLILES S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.11e-76WRKY family protein