PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195463.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 318aa    MW: 34441 Da    PI: 10.2948
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195463.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.3e-31247304359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  XP_019195463.1 247 DDFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 304
                     99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MAVELMMDYR HGGNGRSSDL SFAKKLEESA VAQEAASGLE SVHTFIRLLS QQQQNKAAES  60
REKSSVEIEM VADVAVNKFQ KVINLLGRTR TGHARFRRAP VVSSLPVPAK DIQVDTKVYN  120
PTPIQQVLPP VAGGGGGKTI SFSYSPEVSR ANSFNLSSLT GETESKQASS SSAFQITNLS  180
LASSGGKPPL SSSSLKRKCS SSENNLSGKC SGGSSGRCHC SKRKKLRQKR VTRVPAISMK  240
MADIPPDDFS WRKYGQKPIK GSPHPRGYYK CSSVRGCPAR KHVERALDDP TMLIVTYEGE  300
HNHSLSVPET SSLILESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.14e-79WRKY family protein