PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195569.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 214aa    MW: 23641.5 Da    PI: 8.1065
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.23.8e-24113171359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                     Dg++W+KYG+K+v++s++++sYYrC ++  +Cp+kk+++ s+ d++  +itY+g+Hnh+
  XP_019195569.1 113 DGWAWKKYGKKMVNDSPHSKSYYRCNHEgkNCPAKKHIQLSHMDESKYIITYRGNHNHP 171
                     9**************************999****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MVPERRHFGL EEVIDRFTSG KMREPVLDPQ GTITPPTGLD KAGGSGGIWK NTPAPPQSPN  60
PSPTGSPEKD GGLEDEMLPH EVEEVNEVEM PAEKVPVPVE KVEVPVEKVD EWDGWAWKKY  120
GKKMVNDSPH SKSYYRCNHE GKNCPAKKHI QLSHMDESKY IITYRGNHNH PPPVQNTTTK  180
PRKRGRARAQ ARAPAPPAPK GECSSSTPST NTAT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184193RGRARAQARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.12e-17WRKY family protein