PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196139.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 388aa    MW: 42728.3 Da    PI: 5.8702
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196139.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-18187236255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+    + +r++lg+f tae Aa a+++a+++++g
  XP_019196139.1 187 HYRGVRQRP-WGKFAAEIRDPK----KaARVWLGTFETAEAAALAYDEAALRFKG 236
                     7********.**********94....45************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MPYLDEGIDL LSHELPPLCG EVPLVLLHRL DCGVDGEPMG DDVPTEELFV SPDNVNDVGP  60
ELGGSLELEA AKEERCSTAA AELRFGTVDR RRGEKRPLSL LSDDESEKKE KDDDPTTKAL  120
FYSSPQSQHD MSAMVSALSQ VIGCNNTTTT TTYAAPASIP SLHHQSPHPN LHHQQQPAGG  180
VNQRKRHYRG VRQRPWGKFA AEIRDPKKAA RVWLGTFETA EAAALAYDEA ALRFKGNKAK  240
LNFPERVQGR TQFGYLTTRQ DLPIVSSSSS NHHLYCLRPP NFSSSSSQTT TYPNVDHYAQ  300
LLGRGAGGEL LPNFEVSTTH MFQPPPPLPS SSPSMGTTSN HNIIGYNYLF PFNFGTTCSS  360
SSTSAPNNND NNGKDEWDED LDFKNTRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.14e-36ERF family protein