PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196208.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 154aa    MW: 17539.9 Da    PI: 4.4471
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB79.83.6e-251199391
           NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91
                    ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +++se+++ c++e+r+ti+++ +l al  lGf dy+e++ +  +++r
  XP_019196208.1 11 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCNKEERRTIAPEHVLKALEVLGFGDYIEEVYAAYEQHR 99
                    6899***************************************************************************9987666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MESMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLISSESNE  60
VCNKEERRTI APEHVLKALE VLGFGDYIEE VYAAYEQHRL ETMDTVRAGK WNNVAEMTEE  120
EALAEQQRMF AEARTRMNNG IVVPKQSDPE PEHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.43e-93NF-YB family protein