PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196367.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 147aa    MW: 17316.9 Da    PI: 9.693
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.22.9e-142366248
             NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                    + GfrFhP d+elv ++L++kv +++++    i+e+diy++ePw+L+
  XP_019196367.1 23 AHGFRFHPADQELVLYFLRRKVFQQPFRP---ITEIDIYSFEPWELH 66
                    68************************655...*************96 PP
2NAM58.72e-186811580128
             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g+W atg+d++v + ++e vg+kktLv+++grap g++t W mheyrl
  XP_019196367.1  68 KGFWTATGRDRAVRH-NSEIVGMKKTLVYHEGRAPAGRRTGWQMHEYRL 115
                     8**************.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MAAAEQQHEE ALAMVMPPKP RLAHGFRFHP ADQELVLYFL RRKVFQQPFR PITEIDIYSF  60
EPWELHDKGF WTATGRDRAV RHNSEIVGMK KTLVYHEGRA PAGRRTGWQM HEYRLSIEEL  120
AKAALQQHEK LLYDVTTTLE RKHVIKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-39NAC family protein