PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196370.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 211aa    MW: 23771.8 Da    PI: 5.6517
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196370.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.11.7e-10127102128
             NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                     +kktLv++ g+ p+g++t+Wvmheyrl
  XP_019196370.1   1 MKKTLVYHAGKPPNGRRTNWVMHEYRL 27 
                     8************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MKKTLVYHAG KPPNGRRTNW VMHEYRLLEA GLEQDDSFIL CKIFCKNEMG PPCSGVYGPF  60
KEEDWENDDA MVPRTVRKLG FTGNNKNRVK FDLFSGGDKC VSDDEASSSS TDITHDVPPT  120
GLLNFSLSAQ PNLENHNAHP LPPPKVVGGA FNSSCLEKSL PPGYLKFIND LEEERNKLMD  180
SMKQSEAKIS SLLESNEQLE EEIRRLKNLH F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.22e-25NAC family protein