PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196373.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 326aa    MW: 36386.9 Da    PI: 4.7674
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.91.3e-06204248655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++ r RR+ri ++ +eL +l+P       +K++ ae+ +   +YIk++q
  XP_019196373.1 204 SIAARERRRRIADKTQELGKLIPGG-----QKMNTAEMFQAGYKYIKYMQ 248
                     677899*****************86.....7*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MASLSYCSNW ETTHDHYLNF SETLDDASGL VMASPPFFPQ QQTVVDHQLE APAPAELLFG  60
FNDRSFLLPE SSPSLFSFDP LFNSGEFIFS DNYVSPPPPP PEYLFPGELE FQAHPKRQKL  120
YHDHFPLEIT QNCFGAAFIP NLPLLQDLKP SPPPPSSSLL QESLLPELPS GSSFPAYCDH  180
RGETEVAKKN DSGKCGVKTL SAQSIAARER RRRIADKTQE LGKLIPGGQK MNTAEMFQAG  240
YKYIKYMQTQ LSVLQSCHDS SQESGETYMS EELESLVGSV LIQEKLYSND KCLVPQKFIQ  300
SLPNAHQLDQ ASPLRFDTKS NSDPIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.12e-23bHLH family protein