PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196482.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 233aa    MW: 25470.3 Da    PI: 8.6511
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.3e-203583355
             AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa++ l+g
  XP_019196482.1 35 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARTLRG 83
                    8*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MRRGRAAAAA KQAAAAGTPQ PGNANGSGGS QEIRFRGVRK RPWGRFAAEI RDPWKKTRVW  60
LGTFDSAEDA ARAYDAAART LRGPKAKTNF PLPINSHIPP YPHHQFIQTS NPHDPFIDPR  120
MYSQDHQIIS QRPTSSGMSS TVESFSGPRP PPRPQTTTPP AIPSRHHPRS PPVVPDDCHS  180
DCDSSSSVVE DGDYENFASS SFRKPLPFDL NMPPPMDGVD AEANDLHCTA LCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.11e-35ERF family protein