PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196599.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 220aa    MW: 23938.3 Da    PI: 4.4766
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-182676155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr +  +g+Wv+eIr p++   r r++lg+f+++e+Aa+a +aa  +l+g
  XP_019196599.1 26 CKYRGVRKRN-WGKWVSEIRLPNS---RERIWLGSFDSPEKAARAFDAALFCLRG 76
                    79*****887.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MVKPEKAIKN DNVSTSSPSS SSSSPCKYRG VRKRNWGKWV SEIRLPNSRE RIWLGSFDSP  60
EKAARAFDAA LFCLRGKNAN FNFPDNPPDI VDGNSMSLAQ IKVAAANFAN SEPPPRAAGA  120
MEQQVSDPST SLSSGAESPS PSVSDGAVHQ AEGEMTETAL DHGFLQRFSS LGGNANNAVT  180
DFGYFPGFDD FSNDYYVPPM PIPDTDYVEE TYDGSFLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.16e-47ERF family protein