PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196607.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 704aa    MW: 75788.4 Da    PI: 6.279
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.51.2e-32293350260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     dDgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers+ +++++ei+Y+g Hnh+k
  XP_019196607.1 293 DDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERSH-EGHITEIIYKGAHNHPK 350
                     8****************************************.***************85 PP
2WRKY103.89.6e-33500558159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+
  XP_019196607.1 500 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 558
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    
MGGFDDPVAI MGDWMPPSPS PRAFFSSILG DDLGTRENKT GTLVSEPEGY ASSRNSDGKG  60
GDQAGSMSLL SEQKIGSRGG GLLERMAARA GFNAPRLNTE SIRTANLSQN QEVRSPYLTI  120
PPGLSPTTLL DSPVFLSNSL AQPSPTTGKF PFPSSGDIQN SMMFMESASR KSKESSFDNN  180
DSSSFAFQPV IQTGPSIFPG TFGKVPPSNL ARQSFPSIEP TQVYAQNGTI QRPDFSRSST  240
ENDNGSGNIT SEPMAFNTVA GSTEHSPPPD ELPDEETDQR GSGDPNFLGA PADDGYNWRK  300
YGQKQVKGSE YPRSYYKCTH LNCPVKKKVE RSHEGHITEI IYKGAHNHPK PTPSRRSALG  360
NMQIENTEQG GTGGDGDPIW ANMQKGSGAG DPDWRNDNLE VTTSAPLGSE YCNGSSLQAQ  420
NGTQFESGDA VDRSSTFSND EDEDDRGTHG SVSLGYDGEG DESESKRRKI ETYAADMSGA  480
TRAIREPRVV VQTTSEVDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTSAG CTVRKHVERA  540
SHDLKSVITT YEGKHNHDVP AARNSSHVNS GVSNSGPTQA PAPTHTHLHR PESSQLQNAM  600
ARFEGPLSFG LAGRPPQLGG TPGFGFGMNP QGLTNLAMAG LGPNPGKFPV LPYLGQQRPV  660
NHMSFMLSKG EPKMEPLSDP GLNISNGSSV YQQVMSRLPL GPHM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.10.0WRKY family protein