PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019196608.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 692aa MW: 74582.1 Da PI: 6.3749

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019196608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.5	1.1e-32	281	338	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers+ +++++ei+Y+g Hnh+k XP_019196608.1 281 DDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERSH-EGHITEIIYKGAHNHPK 338 8**************************************.*************85 PP
2	WRKY	103.8	9.4e-33	488	546	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ XP_019196608.1 488 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 546 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MGGFDDPVAI MGDWMPPSPS PRAFFSSILG DDLGTRENKT GTLVSEPEGY ASSRNSDGKG 60 GDQAGSMSLL SEQKIGSRGG GLLERMAARA GFNAPRLNTE SIRTANLSQN QEVRSPYLTI 120 PPGLSPTTLL DSPVFLSNSL AQPSPTTGKF PFPSSGDIQN SMMFMESASR KSKESSFDNN 180 DSSSFAFQPV IQTGPSIFPG TFGKVPPSNL ARQSFPSIEP TQVYAQNGTI QRPDFSRSST 240 ENDNGSGNIT SEHSPPPDEL PDEETDQRGS GDPNFLGAPA DDGYNWRKYG QKQVKGSEYP 300 RSYYKCTHLN CPVKKKVERS HEGHITEIIY KGAHNHPKPT PSRRSALGNM QIENTEQGGT 360 GGDGDPIWAN MQKGSGAGDP DWRNDNLEVT TSAPLGSEYC NGSSLQAQNG TQFESGDAVD 420 RSSTFSNDED EDDRGTHGSV SLGYDGEGDE SESKRRKIET YAADMSGATR AIREPRVVVQ 480 TTSEVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTSAGCT VRKHVERASH DLKSVITTYE 540 GKHNHDVPAA RNSSHVNSGV SNSGPTQAPA PTHTHLHRPE SSQLQNAMAR FEGPLSFGLA 600 GRPPQLGGTP GFGFGMNPQG LTNLAMAGLG PNPGKFPVLP YLGQQRPVNH MSFMLSKGEP 660 KMEPLSDPGL NISNGSSVYQ QVMSRLPLGP HM

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MGGFDDPVAI MGDWMPPSPS PRAFFSSILG DDLGTRENKT GTLVSEPEGY ASSRNSDGKG  60
GDQAGSMSLL SEQKIGSRGG GLLERMAARA GFNAPRLNTE SIRTANLSQN QEVRSPYLTI  120
PPGLSPTTLL DSPVFLSNSL AQPSPTTGKF PFPSSGDIQN SMMFMESASR KSKESSFDNN  180
DSSSFAFQPV IQTGPSIFPG TFGKVPPSNL ARQSFPSIEP TQVYAQNGTI QRPDFSRSST  240
ENDNGSGNIT SEHSPPPDEL PDEETDQRGS GDPNFLGAPA DDGYNWRKYG QKQVKGSEYP  300
RSYYKCTHLN CPVKKKVERS HEGHITEIIY KGAHNHPKPT PSRRSALGNM QIENTEQGGT  360
GGDGDPIWAN MQKGSGAGDP DWRNDNLEVT TSAPLGSEYC NGSSLQAQNG TQFESGDAVD  420
RSSTFSNDED EDDRGTHGSV SLGYDGEGDE SESKRRKIET YAADMSGATR AIREPRVVVQ  480
TTSEVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTSAGCT VRKHVERASH DLKSVITTYE  540
GKHNHDVPAA RNSSHVNSGV SNSGPTQAPA PTHTHLHRPE SSQLQNAMAR FEGPLSFGLA  600
GRPPQLGGTP GFGFGMNPQG LTNLAMAGLG PNPGKFPVLP YLGQQRPVNH MSFMLSKGEP  660
KMEPLSDPGL NISNGSSVYQ QVMSRLPLGP HM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein