PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196657.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 258aa    MW: 27203 Da    PI: 4.6876
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.3e-1968118155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  XP_019196657.1  68 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALSIKG 118
                     68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MAEAETQSSE AESYANSSSS TSPNSSMQNS VLLGSSSGGA EAVKTPKVSE SSRWRGKRGR  60
ESGGHRHPVY RGVRMRSWGK WVSEIREPRK KSRIWLGTYP TAEMAARAHD VAALSIKGSS  120
AILNFPHLAA SLPTPTSRSP RDVQAAAAKA AAMEELNSSS SPSSPLSTSA SSSECASAAT  180
LASDELLLGE IIELPPLEGS VDFLESNAEL TVADAAAAAE GWVYPPWWAS DGAEIFGYFL  240
DQEGDVSLGD CVFPESFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.16e-48ERF family protein