PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196703.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 206aa    MW: 21631.9 Da    PI: 6.7959
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196703.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB184.29.9e-5822117297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+++r++ege
  XP_019196703.1  22 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRDMEGE 116
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_019196703.1 117 K 117
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MADSDNESGG HRDGHGGDSS QREQDRFLPI ANVSRIMKKA LPANAKISKD AKETVQECVS  60
EFISFITGEA SDKCQREKRK TINGDDLLWA MTTLGFEEYV EPLKVYLQRF RDMEGEKSAM  120
AGRQEKDGGG NGSFANMGNS GGSYVGGGEG GVFASGGMGS HAMMMGQHHG HLYGSGVYNQ  180
MGGGGGSGKP GSGYIGSGPP AAGRPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.15e-70NF-YB family protein