PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196949.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 397aa    MW: 42828.3 Da    PI: 6.1651
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.44e-062943321154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_019196949.1 294 VRKEKMGDRITALQQLISPF-----GKTDTASVLSEAIEYIKFL 332
                     5778999***********98.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MAEEFQLGSG NWWESSSSSS SRLNHRFESS SGSSSSSTAA ISSTQNDVSM ESSGFIGCWP  60
THLIVDSKPK SSLDSVSAAG GGGDAALLSH HGFHNIMGLG LSPQQIPCWN NNNIPSLFSS  120
NANASFQQDC SSSYDYDKQM NRLSLDQPQP TPPLSSLEGS TASSDLDRTA SAVLQPESSP  180
MNFSYDVSQN YGMKPGGGGG AVIGDITSPT WSKFPQFLRP RQPQFSNNTT FWNAAMNDDD  240
AQFSLFPVDE KPKNISAGQR DSSTATKTAG CTETSSKRPR DQNDTATPMP AFKVRKEKMG  300
DRITALQQLI SPFGKTDTAS VLSEAIEYIK FLHDQVNVLS TPYLKSGASM RHQLNFEKSK  360
NPETASGQDL RSRGLCLVPI SSTMTFPLTP TFGGCFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.11e-51bHLH family protein