PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196951.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 387aa    MW: 41859.2 Da    PI: 6.3965
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.43.8e-062843221154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_019196951.1 284 VRKEKMGDRITALQQLISPF-----GKTDTASVLSEAIEYIKFL 322
                     5778999***********98.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MAEEFQLGSG NWWESSSSSS SRLNHRFESS SGSSSSSTAA ISSTQNDVSM ESSGFIGCWP  60
THLIVDSKPK SSLDSVSAAG GGGDAALLSH HGFHNIMGLG LSPQQIPCWN NNNIPSLFSS  120
NANASFQQDC SSSYDYDKQM NRLSLDQPQP TASSDLDRTA SAVLQPESSP MNFSYDVSQN  180
YGMKPGGGGG AVIGDITSPT WSKFPQFLRP RQPQFSNNTT FWNAAMNDDD AQFSLFPVDE  240
KPKNISAGQR DSSTATKTAG CTETSSKRPR DQNDTATPMP AFKVRKEKMG DRITALQQLI  300
SPFGKTDTAS VLSEAIEYIK FLHDQVNVLS TPYLKSGASM RHQLNFEKSK NPETASGQDL  360
RSRGLCLVPI SSTMTFPLTP TFGGCFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.11e-51bHLH family protein