PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019197060.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 221aa    MW: 24006.7 Da    PI: 4.585
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019197060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.7e-1850100155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  XP_019197060.1  50 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFSNPEMAARAHDVAALSIKG 100
                     68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MSSDPPDCSS SSEVACESTR AVLDSGSAEK EEPKKMTMKR SRDNSCSKHP VYRGVRMRNW  60
GKWVSEIREP RKKSRIWLGT FSNPEMAARA HDVAALSIKG NSAVLNFPDL AAALPRPASL  120
TPRDIQVAAA KAAAMEKFDP VSSPSPSPSS SCSSEIDPAT SEELSEIVEL PRLGTSFDSP  180
EVGSEFVYVD SVDGWLYPPP WLGSGADDDD SSSFESLLWN Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-64ERF family protein