PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019197212.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GATA
Protein Properties Length: 160aa    MW: 17895.3 Da    PI: 9.6025
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019197212.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.83.1e-186294133
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33
                    Cs+C++t+TplWR+gp g+ tLCnaCG++yr  
  XP_019197212.1 62 CSHCKATETPLWREGPMGPNTLCNACGVRYRTG 94
                    ******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MPNLYFDFIV PIRKRTKRAR SASNPWIRWN GAPSSSTASA SSEKALCGRQ EISDGSKEFR  60
ECSHCKATET PLWREGPMGP NTLCNACGVR YRTGQLFPEY RPANSPTFVP TLHSNSHRKV  120
VEMRRKGVEE ASAAMVEEDS VMRAAAADAE EKKKMEEGKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.29e-38GATA family protein