PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019197319.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 318aa    MW: 34623.9 Da    PI: 9.6669
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019197319.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.83e-14106150347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_019197319.1 106 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 150
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MAALCRSQYV SLRTCGDSAA NDSAVDGAGG AAEIMLFGVR VKVDPMRKSV SLNNLSQYEQ  60
PNNTNKNNES AKNSPPPPPA DEGYASADDA VLHQPSSGRE RKRGVPWTEE EHKLFLLGLQ  120
KVGKGDWRGI SRNFVKTRTP TQVASHAQKY FLRRSNLNRR RRRSSLFDIT TDSVTPMSTA  180
ADVKAPQENS TLAAISPPTP LPTSEPSRIN PFSVSRIPVT VAPVLQPVQV EEKKPIENLA  240
IARTDEVNNP ISRFICPVTT NPSARIELNL NQGMDTEPSF LSLSLSLSVN QSPSSSSRHP  300
IYPGMSSFNN GDTTIIVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.24e-56MYB_related family protein