PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019197346.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 278aa    MW: 30526.9 Da    PI: 9.2657
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019197346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.3e-1977125355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  XP_019197346.1  77 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 125
                     9*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MCGGSILFDR KFRSRDGGRS VSSPDIWPDF GPSSSQTTAK SSFSGQPESA ATTKRSQPCT  60
GNGSPEKAKK RQRKNMYRGI RQRPWGKWAA EIRDPRKGVR VWLGTFNTAE EAARAYDREA  120
RKIRGKKAKV NFPNDEDDSN FNPPAQPGYR RNPLDKSIGK ADLHLEPMIN AGTLIGFGTQ  180
SEEAAAASRS GSENGNEGLI KVKMNDGAEI KEAENQVHKL SEELMVYESY MKFYQIPYLD  240
GEATAAQVNP VPETVVGGGS IDLWSFDDVS PSSVVNSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.16e-30ERF family protein