PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019197883.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 258aa    MW: 28890.5 Da    PI: 4.5694
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019197883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.6e-135395754
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      Er+RR+++N++++ Lr ++Pk +      K++Ka+i + A+eYI++L
  XP_019197883.1 53 VSERNRRKKLNERLFALRAVVPKiS------KMDKASIIKDAIEYIQEL 95
                    57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MENIGDEYKH YWETQTFLQS EELDSYFEEA ISAYYDSSSP DGSQSSAASK NIVSERNRRK  60
KLNERLFALR AVVPKISKMD KASIIKDAIE YIQELREQER IIQAEIWELE SGNGGARSKN  120
NNGIFEFDQE GISSNSKPKR TRLVDDQLPA PGAGGYDESP PPGSTSPVDV LELRVSSMGK  180
KTVVVSLTCS KRTDTMMKLC EIFESLDIKI ISANITAFSG RLLKTVFIEA EEEEKDLLKI  240
RIETAIATLN DPDSPMGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.17e-74bHLH family protein