PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019198050.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 526aa MW: 56906.1 Da PI: 7.9559

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019198050.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.3e-30	164	223	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+ XP_019198050.1 164 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApNCPVRKQVQRCADDMSILITTYEGTHNHP 223 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MGEVMEENQR LKMYLERMMN DYRTLQMQFQ GMVEKEEGEK AAKSENDNNT PQVTEESDQL 60 VSLSLGRASA EMKRSIMCGA GKDNEENDEK EGLTLGLDCK FKSLQPNNQS TDNSSDEVKE 120 ENGETWPPSK ALKTTRSGED EVSQQNPAKR ARVSVRVRCD APTMNDGCQW RKYGQKIAKG 180 NPCPRAYYRC TVAPNCPVRK QVQRCADDMS ILITTYEGTH NHPLPLSATA IASTTSAAAS 240 MLMSGSSTSA STSMPPGTTT ATTTSTANLN GLNFYLSDAS KPKPFYIPTS SIAPTLGHPT 300 IVLDLTSSAP SSTSSNLSRI GSLGNYPPRF SSTNLNFSSL ESNPLPISWN LGTTQPYNKP 360 HISSSLSFAR QQQQHQQQPF HQDNQILFQS YLSKNNLNNN NTPSQSLPQE TIAAATKAIT 420 SDPNFQSALA AALSSIIGTN NGNSGTSLNN LGIHGLAEKL SQNLKAAAEP FPILSSFSPS 480 PNPNKCSSSL LSRPTTTSSA NPHPGNLMYH LQQTSKSKSS SPGDSR

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MGEVMEENQR LKMYLERMMN DYRTLQMQFQ GMVEKEEGEK AAKSENDNNT PQVTEESDQL  60
VSLSLGRASA EMKRSIMCGA GKDNEENDEK EGLTLGLDCK FKSLQPNNQS TDNSSDEVKE  120
ENGETWPPSK ALKTTRSGED EVSQQNPAKR ARVSVRVRCD APTMNDGCQW RKYGQKIAKG  180
NPCPRAYYRC TVAPNCPVRK QVQRCADDMS ILITTYEGTH NHPLPLSATA IASTTSAAAS  240
MLMSGSSTSA STSMPPGTTT ATTTSTANLN GLNFYLSDAS KPKPFYIPTS SIAPTLGHPT  300
IVLDLTSSAP SSTSSNLSRI GSLGNYPPRF SSTNLNFSSL ESNPLPISWN LGTTQPYNKP  360
HISSSLSFAR QQQQHQQQPF HQDNQILFQS YLSKNNLNNN NTPSQSLPQE TIAAATKAIT  420
SDPNFQSALA AALSSIIGTN NGNSGTSLNN LGIHGLAEKL SQNLKAAAEP FPILSSFSPS  480
PNPNKCSSSL LSRPTTTSSA NPHPGNLMYH LQQTSKSKSS SPGDSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	5e-58	WRKY family protein