PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019198096.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 92aa    MW: 10449.8 Da    PI: 7.2589
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019198096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.96.7e-0716561554
                    HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    +iN   ++L+ llP   s+ +  K+  +ei+e++++YIk L
  XP_019198096.1 16 EINALVNKLQALLPAsTSRSYTNKVAASEIVEETCKYIKRL 56
                    799999*********7779999999999***********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRRSSSS SFTEEEINAL VNKLQALLPA STSRSYTNKV AASEIVEETC KYIKRLHREV  60
DGLCERLSQK LSSIDDTTNL DLETLMRNLL QQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.19e-18bHLH family protein