PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019198295.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 192aa    MW: 21789.2 Da    PI: 8.964
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019198295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-11249454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   +ve+Ik+L
  XP_019198295.1  2 SHIAVERNRRRQMNEHLKILRSLTPCF---YIKRGDQASIIGGVVEFIKEL 49
                    89************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MSHIAVERNR RRQMNEHLKI LRSLTPCFYI KRGDQASIIG GVVEFIKELH QVEQSLEAKK  60
RRKSLSPSPV PSPRLPETPL FLNNNNFNSF KEVGACCNSP VADVEARISG TNVVLRTVSR  120
RIPGQIVRII NVLERLSFEI LHLNISSMED TVLYSFVVKI GLECQLSVED LALEVQQSFR  180
SQTAAYIKEI EN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-80bHLH family protein