PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019198484.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 184aa    MW: 20554.1 Da    PI: 4.9824
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019198484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-182675255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr ++ +g+Wv+eIr+p++   + r++lg++ t+e+Aa+a++ a+++++g
  XP_019198484.1 26 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYSTPEMAARAHDVAALSIKG 75
                    59****998.**********843...6***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MAEDEGSRRA LPSKRPRDQR RPPVTTYRGV RMRSWGKWVS EIREPRKKSR IWLGTYSTPE  60
MAARAHDVAA LSIKGASATL NFPHLTDCLP RPASLHPRDV QAAAAKAAAM EDLNSDNVVC  120
TSEEEEEELA AIIELPTLDG SFESRPELKL VDSAESWVLH DEFCGYFVDQ VADGESVILK  180
WDSC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1822RRALPSKRPRDQRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-44ERF family protein