PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019198760.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HSF
Protein Properties Length: 328aa    MW: 37770.3 Da    PI: 4.6692
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019198760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind96.42.9e-30321242103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+++++ed+++++l+sws+ng sfv++d+++fa ++Lp+yFkhsn+aSF+ QLn YgF+kv++e+          e+++++F+ gkk+ l++
  XP_019198760.1  32 FLLKIFDMVEDPNTDSLVSWSSNGASFVIWDHNRFAAELLPEYFKHSNLASFIYQLNNYGFRKVNSER---------HEYENQWFRPGKKDWLRS 117
                     9*****************************************************************99.........57**************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+ + ++
  XP_019198760.1 118 IRSRVQK 124
                     *999775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MELARMQGEI DSPGCGDNNN ANPVGLFATP RFLLKIFDMV EDPNTDSLVS WSSNGASFVI  60
WDHNRFAAEL LPEYFKHSNL ASFIYQLNNY GFRKVNSERH EYENQWFRPG KKDWLRSIRS  120
RVQKSKMLQK KNGSSFTAPV VTEDLDVMMK KLKAEQIALR AEIQKLKEQQ ENMEKELARP  180
QEMENSDYGD DDEEKRVISS FSLEFLQLVK RKAGTDNEGG RKKKKGDDDE EAVVIKPDLQ  240
CLDEAKKEEE NARRNAENSA FWKKIFEDDS DAENGVEEVQ PLKDRKIMVE LDDMMASKIA  300
MEEGLSLISK VASLGEEDHD EAHFQLWT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210225KRKAGTDNEGGRKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54070.12e-36HSF family protein