PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019199127.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WOX
Protein Properties Length: 216aa    MW: 24814.4 Da    PI: 9.886
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019199127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.64.4e-18970157
                    TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    r +R+++t+eql +L+el+++  r+p+  + + ++++l    ++++++V++WFqN++a++++
  XP_019199127.1  9 RPRRWSPTPEQLMVLQELYRRgLRNPNGFQVRTITSHLalygKIETKNVFYWFQNHKARDRQ 70
                    568*****************99*************************************996 PP
2Wus_type_Homeobox101.65.6e-331171464
  Wus_type_Homeobox  4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                        RW+PtpeQ+++L+ely++Glr+Pn  +++ it++L+ yGkie kNVfyWFQN+kaR+rq+
     XP_019199127.1 11 RRWSPTPEQLMVLQELYRRGLRNPNGFQVRTITSHLALYGKIETKNVFYWFQNHKARDRQR 71
                       6***********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MVGGEVTCRP RRWSPTPEQL MVLQELYRRG LRNPNGFQVR TITSHLALYG KIETKNVFYW  60
FQNHKARDRQ RLRKTLIKQH LRYRPVFARQ EEPQQPAHSA AQVQNCCHHQ LLDGRSSLDF  120
CSAFSDHLSP RFSTFLHQGG GGEKIVNMGV PTSSCDDAGS SMTTRMFDRD WMMLMETRSC  180
VPRWVDRTPI TLQLFPLQAT NIKAESTTIS TPVSSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.13e-36WOX family protein