PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019199302.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 302aa    MW: 32986.5 Da    PI: 6.5877
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019199302.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.51.7e-393696363
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    e+a+kcprC+stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++sss
  XP_019199302.1 36 EHAQKCPRCESTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNRRSSS 96
                    6789*****************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MDPSCAQEMS SQTLESMVEA SAKAQQQEKK PRPADEHAQK CPRCESTNTK FCYYNNYSLS  60
QPRYFCKSCR RYWTKGGTLR NVPVGGGCRK NRRSSSSSSK PRISTGQQDP HQSLTSSPVL  120
TTFPYESPHD LGLTFASLQK QADGNLGLED HDMAAAPMMC NPNNTLSDVL GNYGAASATP  180
HGFLDSLRGT GFLEPPTNGL LYHNNSLQYY GAVGEMGMPP YDVHMGGGVS TSAAVKQEMY  240
SNGRDNNEGD DDNRVLWGFP WQHGGEGNMN MVVVNDVDSS RQNSCNIGFG SSWHGLVNSP  300
LM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.12e-44Dof family protein