PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019199607.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 204aa    MW: 22694.9 Da    PI: 4.9069
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019199607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.74.2e-16243548
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     T++E+ l+++ + ++G++ W++Iar+++ gRt++++k++w++++
   XP_019199607.1  2 TPQEERLILEFHSKWGNK-WSRIARKLP-GRTDNEIKNYWRTHM 43
                     9*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MTPQEERLIL EFHSKWGNKW SRIARKLPGR TDNEIKNYWR THMRKKAQEK KKNNNNGGAC  60
ISASSSSLTN CCSYSSSANS PPAVESVVDE ANERDFYDTG GVDEELPPTH DNGAAAAAKA  120
YTMDEIWKDI EQLGDVYCGN QPRSVTSSSS PMWNYWAETL LMTADYNHGG GGESKIVPFP  180
PPPPPTNDQF YSSFDNQDSI FLTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.21e-29MYB_related family protein