PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019199847.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 207aa MW: 23310.1 Da PI: 9.798

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019199847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.7	4.9e-33	128	186	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+++fprsYY+Ct++gC+vkk+v+r ++d++vv++tYeg H h+ XP_019199847.1 128 LDDGYRWRKYGQKSVKNNNFPRSYYKCTHQGCNVKKQVQRLSKDETVVVTTYEGMHSHP 186 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MEAYPTLFGS SSSSPLRLSP HLSLASMGNN HHEMNNSYMK EDAARGDLQF HGGKGMKGLL 60 EQLKRTEAAA APTSDMKSHD SSISTNSLTA ESDEAAKSSS SGYKIKKGEK KIRKPRYAFQ 120 TRSQVDILDD GYRWRKYGQK SVKNNNFPRS YYKCTHQGCN VKKQVQRLSK DETVVVTTYE 180 GMHSHPIEKS TDNFEHILSQ MQIYASF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	6e-57	WRKY family protein