PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019199919.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Nin-like
Protein Properties Length: 257aa    MW: 29290 Da    PI: 4.8828
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019199919.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.42.1e-26116164452
          RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      +  e++skyF++pi++AA+eL+v+lT+LK++CR++GI+RWPhRk+ksl
  XP_019199919.1 116 MLCRETISKYFYMPITKAARELNVGLTLLKKRCRELGIRRWPHRKLKSL 164
                     567899*****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MVPAGENNLQ LSFPVQSWPD NLAWDYDYHY DYDFPMQTTH TSFDYYYSFP LMDMFLINDP  60
LYSQSIIQGG SSVVYGDDEG VEEQEKMVLL GDDDEYHSNN GGGNKKKGRN NDCSKMLCRE  120
TISKYFYMPI TKAARELNVG LTLLKKRCRE LGIRRWPHRK LKSLQTLIGN VQVLGKGEEE  180
EKLREAVELL EKQKKEIEES PDMEMEDTTK KLRQACFKAN YKKRKLTVAA AGMPSSPSSA  240
AAISAGATAT LDYDEED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.13e-37Nin-like family protein