PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019200130.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 343aa    MW: 36582.9 Da    PI: 4.5289
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019200130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.22.5e-12105155255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r++h  +Er+RR+++N  ++ Lr+l+P     + k+ + a+i   +v+YI +Lq
  XP_019200130.1 105 RMSHITVERNRRKQMNGHLSVLRSLMPCF---YVKRGDQASIIGGVVDYITELQ 155
                     89**************************9...9*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MDTAGNLSDF FEDSEFAGDA SPDDIFGILE ALDDFNQTAA PAFSGETAAG KDNDGGGVRE  60
LLSETEVEGS NSLSPPRNCK RQKSSAATAA VPDDVNPSSD EQQPRMSHIT VERNRRKQMN  120
GHLSVLRSLM PCFYVKRGDQ ASIIGGVVDY ITELQQVVES LEAKKQRKVY NEVLLSPRKP  180
ALSPRMSSYP ISPTTPQPTT SYGAACRPPL LPTPTTGFLS SSSSSSAASQ LIIEPPSSCS  240
PTATSSASVD SANELAANSK SEIAEVEVKF SGANVVVKTV SPRIPGQAVK IISALEDLSL  300
EILHVSISVI NDHTMLNSFT IKIGIECQLS AEELAQQIQQ TFC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105116RMSHITVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.19e-46bHLH family protein