PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019200162.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 121aa MW: 13982 Da PI: 4.6144

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019200162.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	70	3.7e-22	1	52	4	55
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 + Wt eLH++F++av +LGG++ A+ ++ilelm+v+gLt ++v SHLQk R+ XP_019200162.1 1 MFWTFELHSQFMDAVIELGGIKDAVSSQILELMDVPGLTWKNVNSHLQKIRI 52 57***********************************************996 PP
2	Myb_DNA-binding	24	9e-08	3	50	4	47
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqky 47 WT e++ ++ dav +lGg + I + m g+t k++ s++qk XP_019200162.1 3 WTFELHSQFMDAVIELGGIkdaVSSQILELMDvPGLTWKNVNSHLQKI 50 *****************8899999999999999999999999999996 PP

Sequence ? help Back to Top
Protein Sequence Length: 121 aa Download sequence
MFWTFELHSQ FMDAVIELGG IKDAVSSQIL ELMDVPGLTW KNVNSHLQKI RILQVRGPER 60 MNKNAIFHQQ YLLTTTGGAR IFQDWSRFLS ACSSFRNDDD IMNDIYGSLS PLWDLPMLED 120 D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	2e-14	ARR-B family protein