PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019200257.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 249aa    MW: 26969.8 Da    PI: 4.8072
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019200257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.4e-174594255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+ +++g
  XP_019200257.1 45 SYVGVRMRA-WGKWVSEIREPKK---KSRIWLGTFATPEMAARAHDVAAMSIKG 94
                    79****998.**********854...6**********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MAEPPFCHET ELSTSNSSWS RSKRPREDAG GGGKSGRRSD LKHPSYVGVR MRAWGKWVSE  60
IREPKKKSRI WLGTFATPEM AARAHDVAAM SIKGDTALLN FPALAGLLPR PASSTPRDVR  120
AAAVKAAHMD HLDPPKPPSS SSSLASSPSS SSLVSTVTSG EDASTPPQEE EDDDAPPSPA  180
ELGEIVELPE LRDNTEPTRD EFIFVDSYGW DFCHPWSHLD DCGYYATAVA GDGFDAVLSG  240
DFDSCLWQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.16e-46ERF family protein