PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019200359.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 220aa    MW: 24415.4 Da    PI: 6.072
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019200359.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08125165954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR++i +++  L++l+P       +K++ a++L +A++Y+k L
  XP_019200359.1 125 ARLRREKISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 165
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MDINHHYLKF ISDNSSWGGE PSSIPMEADH HHHHQFPFHD QTVWPSNFQH HTENLQIPAC  60
LGAGGGSNGE DNGEEDEGEE EELGAVKEMM FKIAAMQPVD IDPATIRKPK RKNVRISDDP  120
QSVAARLRRE KISEKIRILQ RLVPGGTKMD TASMLDEAIR YVKFLKRQIR LLQLNHQPPP  180
PPPPPPAGNW GAAATTTFGG NAVTDDPTAS MCLNHEVIGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.13e-45bHLH family protein