PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019200545.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 254aa    MW: 28828.5 Da    PI: 7.9935
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019200545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.7e-18167217255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+      r++lg+++t  +Aa+a++ a+ k++g
  XP_019200545.1 167 RYRGVRRRP-WGKFAAEIRDPTRK--GSRIWLGTYDTDIDAARAYDCAAFKMRG 217
                     7********.**********8542..4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MYLYSIYMSY PYPASLKISI PIFFFFYIYT AGMEDRQMND TCMMTTTDEF MTLELISQYL  60
LGDFASTEAF IGNLGFCFPD DDFNDYRPFS GSDKPESSTS VSDSVSPVPD LKRPESPVSR  120
YLNLELDFPE FETKPDIIVR STPDSSSTTQ NSAGANKESG NGGKGRRYRG VRRRPWGKFA  180
AEIRDPTRKG SRIWLGTYDT DIDAARAYDC AAFKMRGRKA ILNFPLDAGK SGPPVNHGRN  240
RRKEIKSRVK EEIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.17e-33ERF family protein