PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019200547.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 243aa    MW: 26939.5 Da    PI: 8.3152
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019200547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.4e-2089139255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta +Aaka+++a+ kl+g
  XP_019200547.1  89 HYRGVRQRP-WGKFAAEIRDP---NrKGTRVWLGTFDTAVDAAKAYDRAAFKLRG 139
                     7********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MALSGENCTL EQIRHLLLDD PAFNQLYCNS EQNCFNPQVV ASSPSSKFNE RKPSLNIAIP  60
RPAAVNNKGA GQMPPPPEIQ DSGEVVKRHY RGVRQRPWGK FAAEIRDPNR KGTRVWLGTF  120
DTAVDAAKAY DRAAFKLRGS KAILNFPLEV ENFRPESQPQ PPPTFGQKRP REAEEEVAVI  180
KQVKREVVEE SSEAPQPPPA AAAAAAPLTP SSWMTVWDCS EAKGIFEIPP LSPNVYNYHG  240
IRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.15e-42ERF family protein