PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020671735.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 212aa    MW: 24318.2 Da    PI: 7.8924
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020671735.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.21.6e-173377248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     gr+T++E+ l+++++ ++G++ W++Iar+++ gRt++++k++w++++
   XP_020671735.1 33 GRMTPQEERLILELHSEWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 77
                     89*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MDRTGRPATG LNRTGKSCRL RWFNYLQPGL KHGRMTPQEE RLILELHSEW GNRWSRIARR  60
LPGRTDNEIK NYWRTHMRKK AQERKKNSSS SASTISTCLS THSASPLDAT TTKNEEDGSS  120
LITEKESREK EYAVNVYPME QIWNDIASLE SGGSSFAQCT VERCNLSCDP PPMTSPVQEH  180
FVDYLWMMDD NEFSKIATSN DFRFLTSGII ES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.34e-52MYB_related family protein