PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020671779.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WRKY

Protein Properties

Length: 154aa MW: 17866.6 Da PI: 5.283

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020671779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98	6.1e-31	86	144	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk+s +pr+YYrC+ +gC+vkk++er +edp++v++ Yeg+Hnh+ XP_020671779.1 86 LDDGYKWRKYGKKMVKSSSNPRNYYRCSIEGCNVKKRIERMEEDPSYVITSYEGTHNHH 144 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
MASNSSFLSP NFSEPGDFDD IYFEFGDFFI SDEAEFSEDQ QVVSQYQQNS LFQVNDGGNL 60 SCVQKNNNRL KSTRVSFKTK SDRDVLDDGY KWRKYGKKMV KSSSNPRNYY RCSIEGCNVK 120 KRIERMEEDP SYVITSYEGT HNHHPLNQLS CSEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	2e-37	WRKY family protein