PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020671853.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

HSF

Protein Properties

Length: 251aa MW: 29609.7 Da PI: 7.0718

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020671853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.8	1.1e-35	26	118	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+ +++++sw e++n+f+v+ + +fak++LpkyFkh+nf+SFvRQLn+YgF+k+ e+ weF+++ Fkkg+k+ll + XP_020671853.1 26 FLTKTYHLVDDPCTDHIVSWGEDNNTFIVWRPPDFAKDLLPKYFKHNNFSSFVRQLNTYGFRKIVAER---------WEFANEFFKKGEKHLLLE 111 9**************************************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ XP_020671853.1 112 IHRRKNH 118 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MAFLVEKSCD DMVVPVNSQK PIPAPFLTKT YHLVDDPCTD HIVSWGEDNN TFIVWRPPDF 60 AKDLLPKYFK HNNFSSFVRQ LNTYGFRKIV AERWEFANEF FKKGEKHLLL EIHRRKNHHI 120 HHHHHQQQHC FHYSQPSFQC YTEVIVEPPP RLSSTLDDTS FLLALSEDNL RLRRRNSLLL 180 SELNHLKKLY DDIIHYLQQH VSPLHTYRHG MLIEMATTGQ PQCSVTIRGE EEEGHDCTVK 240 LFGVPIYDKE L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	8e-59	HSF family protein