PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020672055.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

BES1

Protein Properties

Length: 294aa MW: 31736.6 Da PI: 8.0528

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020672055.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	186.7	9.4e-58	2	140	1	149
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 ++++r ptwkErEnnkrRERrRRaiaakiyaGLR +Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+e ++++g+ s++ss+q XP_020672055.2 2 TSATRLPTWKERENNKRRERRRRAIAAKIYAGLRVNGNYKLPKHCDNNEVLKALCNEAGWTVEADGTTYRKGCKPPELMDITGA----STCSSYQ 92 5799************************************************************************88888776....5799999 PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149 s+ ss+++sp++s + +++ +ps+ l + +a+ l+p+l++ls++sss XP_020672055.2 93 PSPASSSFPSPASS--PYLSTPRIPSNLPLAT----DANFLIPWLKNLSSTSSS 140 88889988888654..4555555665555433....346789999999887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MTSATRLPTW KERENNKRRE RRRRAIAAKI YAGLRVNGNY KLPKHCDNNE VLKALCNEAG 60 WTVEADGTTY RKGCKPPELM DITGASTCSS YQPSPASSSF PSPASSPYLS TPRIPSNLPL 120 ATDANFLIPW LKNLSSTSSS SSSKPPSLHN LFIHHGSLSA PVTPPLSSPT AQTPRIKTDW 180 DDPANTLQPS WPPSPTFSLV SPSPFGLYRE GIESGGSSRM WTPGQSGMCS PVNAGPDVQM 240 MDSAVAAEEF AFGSCGNGGI VNQMLVKPWE GERIHEECGA DELELTLGSS RTRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	2e-74	BES1 family protein