PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020672114.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YC
Protein Properties Length: 111aa    MW: 12214.2 Da    PI: 8.4912
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020672114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC108.73.4e-3418981998
           NF-YC 19 helPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                    h+lPl+rikki+k+  edvkmis+eaP +++kacelfi elt r++  + + krrtl++ diaaavt td fdfl+++v  
  XP_020672114.1 18 HSLPLSRIKKIMKQsGEDVKMISCEAPLVFAKACELFIEELTARAYKVTMQGKRRTLQREDIAAAVTATDLFDFLLEMVSA 98
                    89**********96269***********************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MRQAGIYSGI LCGKNGPHSL PLSRIKKIMK QSGEDVKMIS CEAPLVFAKA CELFIEELTA  60
RAYKVTMQGK RRTLQREDIA AAVTATDLFD FLLEMVSASV INDGRTTTES T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.39e-35NF-YC family protein