PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020672239.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 177aa    MW: 19292.9 Da    PI: 5.0274
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020672239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.9e-053961123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y C +C++ F++   L  H+++H
  XP_020672239.1 39 YDCVYCKRGFTTAQALGGHMNMH 61
                    88*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MEEEGEEEKL KAAGDSQAES SEPAADEPGT STGGSARFYD CVYCKRGFTT AQALGGHMNM  60
HRHDRARLRP ARPSPSSPRK SEEAYHPYSR AQRPPPKQSA GEQSSSSSYV VYFPASSSEE  120
GSQRATELAQ AGEELQLGLG GSGSKEEKEK KKELVEEDLD LELRLGHRKS QESNSSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.17e-11C2H2 family protein