PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020672256.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 117aa    MW: 13244.5 Da    PI: 5.066
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020672256.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16.1e-201162155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr+++ +g+++AeIrd s    + +r++lg+f taeeAa+a+++a+ +++g
  XP_020672256.1 11 TRYRGVRRRP-WGKFAAEIRDSSR---HgARVWLGTFSTAEEAARAYDRAAYSMRG 62
                    68********.**********432...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MERDESAGKE TRYRGVRRRP WGKFAAEIRD SSRHGARVWL GTFSTAEEAA RAYDRAAYSM  60
RGSLAVLNFP DERHLYAADA SASSSRNETK KEVIELECLD DKVLEDLLDS GEEEKSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-32ERF family protein