PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020672381.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family CAMTA
Protein Properties Length: 226aa    MW: 25793.2 Da    PI: 9.7602
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020672381.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1180.91.5e-56201363118
            CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                     +e ++rwl+++ei++iL n++k+ ++ e++++p+sgsl+L++rk++ryfr+DG++w+kkkdgktv+E+hekLK g+++vl+cyYah+e+++ fqr
  XP_020672381.1  20 QEaQHRWLRPTEICEILRNYHKFCIAPEPPNKPTSGSLFLFDRKVLRYFRRDGHNWRKKKDGKTVKEAHEKLKAGSIDVLHCYYAHGEDKEGFQR 114
                     5559******************************************************************************************* PP

            CG-1  97 rcywlLeeelekivlvhylevk 118
                     r+yw+Le +l +ivlvhy+evk
  XP_020672381.1 115 RSYWMLEGALMHIVLVHYREVK 136
                     *******************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAVNRRTGVA PVLDIEKILQ EAQHRWLRPT EICEILRNYH KFCIAPEPPN KPTSGSLFLF  60
DRKVLRYFRR DGHNWRKKKD GKTVKEAHEK LKAGSIDVLH CYYAHGEDKE GFQRRSYWML  120
EGALMHIVLV HYREVKGSKA SFIQQKKDAE AVRNSEFDSP ASSNSSANPS HVPSQFSGYG  180
SRNGTQQSEY EDADSLYLKR SSIHQIIARQ VPDTTLSLRC SGMGLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.26e-75CAMTA family protein