PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020672781.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 205aa    MW: 22653.3 Da    PI: 8.5048
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020672781.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-1995143355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+W+AeIrdp+    r  r +lg+f taeeAa+a+++a+ +++g
  XP_020672781.1  95 YRGVRRRP-WGKWAAEIRDPR----RaVRKWLGTFNTAEEAARAYDNAAIEFRG 143
                     9*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MKPNQEFFFQ SSPDNVSLMD SNNPPSVHRP LTAEEENAAI VAALTHVISG HPDNTVPLSL  60
SHISIPVKLP ATTVVAAREE QGKGGPSRRK KGNNYRGVRR RPWGKWAAEI RDPRRAVRKW  120
LGTFNTAEEA ARAYDNAAIE FRGRRAKLNF PFTDWDTSSS SGRRETGMTS PTAVSQNEEI  180
GGLWEGLQDL IELDGEVSTD RCGLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-24ERF family protein