PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020673061.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 218aa MW: 23476.1 Da PI: 10.0888

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020673061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.7	3e-39	34	92	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +k+l+cprC+s+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rknk+s XP_020673061.1 34 QKQLNCPRCNSNNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRS 92 7899*****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MDAAQWSKEA AVAETAATKA PAISERKNRR KNDQKQLNCP RCNSNNTKFC YYNNYSLTQP 60 RYFCKTCRRY WTEGGSLRNI PVGGGSRKNK RSITATSSST PSSSSMQNHP KFSSTDQVRD 120 LNLGFQQGGG SGLPELGILR GGGMSGRQMG SNFMHEVFGL QELGLGFQVG AGGATDHDEG 180 RVLFSSSAPR DGILGQNRGL GGETQGFWNG MMGGGGSW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	27	32	KNRRKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	8e-36	Dof family protein