PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020673111.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WRKY

Protein Properties

Length: 256aa MW: 28023 Da PI: 6.7135

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020673111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.1	3.7e-33	125	182	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp++v++tYeg+H h+ XP_020673111.1 125 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPSIVITTYEGQHCHH 182 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MENKIDSTTG DPTWDFSSDG CGGIAYLYGE GDGGGHGWAP PRIHEEEPDT WCSLPPPDLS 60 EASGSAAARS GGDAVSSSSS EGPPADPGDK PPADSPNNKT SKKVQKRVRQ PRFAFMTKSE 120 IDHLEDGYRW RKYGQKAVKN SPFPRSYYRC TNSKCTVKKR VERSSDDPSI VITTYEGQHC 180 HHTVNFPRAA AIGFHDHIRT TSSLLENISP PPQQQQQQLY FPATTLLQSV PELPTVLPND 240 DGLLGDIVSP GMRGRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	1e-60	WRKY family protein