PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020673248.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family HB-other
Protein Properties Length: 301aa    MW: 34783.4 Da    PI: 4.835
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020673248.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.81.8e-08234281653
                     S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
        Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                     +++k ql +Le+++++++ p+ +++  + + ++L+ ++V  WF  +R 
  XP_020673248.2 234 RIKKVQLITLERVYARTKRPTNAMISSIVHVTNLPWKRVVKWFEDKRL 281
                     68899***************************************9995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGESNVGGEG VATVGNVDQR GVVALAAIFD RGLFHWKLKR VFCENRTPEH NDREKDKIDE  60
DAFEALFSQL EEDLKTDVIF SEDEKDEITE DDLVRLEQEL DEALCDEEFD EVFPSRSDDM  120
NYSDDDEELQ PKLKNWQLRR LAYALKIGRR KASIKNLSSE LGLERARVLE LLREPPPNLV  180
MMCASLPEEV AKNPEPVCEP VESSFDSDIS ISKSEPKEVV PVHVMQTRWS MQKRIKKVQL  240
ITLERVYART KRPTNAMISS IVHVTNLPWK RVVKWFEDKR LEDGVPVHRE PFHRSSHVKT  300
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.18e-47HB-other family protein