PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020673363.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 199aa    MW: 21704.6 Da    PI: 9.7232
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020673363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-182977355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++GVr ++ +gr++AeIrdp +   ++r++lg+f++ae+Aa+a++ a+++l+g
  XP_020673363.1 29 FRGVRKRP-WGRFAAEIRDPLK---KTRVWLGTFDSAEDAARAYDVAARELRG 77
                    8*******.**********743...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MMRKGRTLAA GEAHLTDAPP QPPPKEIRFR GVRKRPWGRF AAEIRDPLKK TRVWLGTFDS  60
AEDAARAYDV AARELRGCKA KTNFPPLIAG GIHVDAQFFP NPAPTPPRPT SSSLSSTVES  120
FSGPRLSIPR PPSIHIRPPA NQAPLRVLTG DEDCHSDCGS SSSVVDNGDV ASEYRKPLPF  180
DLNLLPPPND DLQSTVLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-23ERF family protein